Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVRPLNCIVAVSQNMGIGKNGDLPWPPLRNEFKYFQRMTTTSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINIVLSRELKEPPRGAHFLAKSLDDALRLIEQPELASKVDMVWIVGGSSVYQEAMNQPGHLRLFVTRIMQEFESDTFFPEIDLGKYKLLPEYPGVLSEVQEEKGIKYKFEVYEKKD
3NZD Chain:A ((1-186))-VGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKND


General information:
TITO was launched using:
RESULT:

Template: 3NZD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116816 for 1396 contacts (-83.7/contact) +
2D Compatibility (PS) -19898 + (NN) -6932 + (LL) 208
1D Compatibility (HY) -26400 + (ID) 8350
Total energy: -178188.0 ( -127.64 by residue)
QMean score : 0.676

(partial model without unconserved sides chains):
PDB file : Tito_3NZD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NZD-query.scw
PDB file : Tito_Scwrl_3NZD.pdb: