Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFVLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPNATLIFDVELLKLE
1D7I Chain:B ((1-107))
-GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKLE
General information:
TITO was launched using:
RESULT:
Template:
1D7I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53470 for 785 contacts (-68.1/contact) +
2D Compatibility (PS) -11976 + (NN) -5550 + (LL) 208
1D Compatibility (HY) -13600 + (ID) 5200
Total energy: -89588.0 ( -114.12 by residue)
QMean score : 0.728
(partial model without unconserved sides chains):
PDB file :
Tito_1D7I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D7I-query.scw
PDB file :
Tito_Scwrl_1D7I.pdb
: