Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MACGLVASNLNLKPGECLRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVFPFQPGSVAEVCITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADGDFKIKCVAFD
1SLC Chain:B ((1-134))
-ACGLVASNLNLKPGECLRVRGEVAADAKSFLLNLGKDDNNLCLHFNPRFNAHGDVNTIVCNSKDAGAWGAEQRESAFPFQPGSVVEVCISFNQTDLTIKLPDGYEFKFPNRLNLEAINYLSAGGDFKIKCVAFE
General information:
TITO was launched using:
RESULT:
Template:
1SLC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69916 for 992 contacts (-70.5/contact) +
2D Compatibility (PS) -14188 + (NN) -1994 + (LL) 208
1D Compatibility (HY) -17600 + (ID) 5800
Total energy: -109290.0 ( -110.17 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_1SLC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SLC-query.scw
PDB file :
Tito_Scwrl_1SLC.pdb
: