Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE
3TCZ Chain:A ((1-158))
-----KLPPGWEKAMSRSSGRVYYFNHITNASQWERPS------------EPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE
General information:
TITO was launched using:
RESULT:
Template:
3TCZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30073 for 1096 contacts (-27.4/contact) +
2D Compatibility (PS) -15833 + (NN) -10928 + (LL) -436
1D Compatibility (HY) -15600 + (ID) 7250
Total energy: -80120.0 ( -73.10 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_3TCZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TCZ-query.scw
PDB file :
Tito_Scwrl_3TCZ.pdb
: