Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKFNKPLLALLIGSTLCSAAQAAAPGKPTIAWGNTKFAIVEVDQAATAYNNLVKVKNAADVSVSWNLWNGDAGTTAKILLNGKEAWSGPSTGSSGTANFKVNKGGRYQMQVALCNADGCTASDATEIVVADTDGSHLAPLKEPLLEKNKPYKQNSGKVVGSYFVEWGVYGRNFTVDKIPAQNLTHLLYGFIPICGGNGI-NDSLKEIEGSFQALQRSCQG-------REDFKVSIHDPFAALQKAQKGVTAWDDPYKGNFGQLMALKQAHPDLKILPSIGGWTLSDPFFFM-GDKVKRDRFVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSAETGRKYELTSAISAGKDKIDKVAYNVAQNSMDHIFLMSYDFYGPFDLKNLGHQTALNAPAWKP------DTAYTTVNGVNALLAQGVKPGKVVVGTAMYGRGWTGVNGYQNN--IPFTGTATGPVKGTWKNGIVDYRQIAGQFM-SGEWQYTYDATAEAPYVFKPSTGDLITFDDARSVQAKGKYVLDKQLGGLFSWEIDADNG-DILNSMNASLGNSAGVQ |
| 1ITX Chain:A ((10-419)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------DSYKIVGYYPSWAAYGRNYNVADIDPTKVTHINYAFADICWNGIHGNPD----PSGPNPVTWTCQNEKSQTINVPNGTIVLGDPWIDTGKTFAGD-TWDQPIAGNINQLNKLKQTNPNLKTIISVGGWTWSNRFSDVAATAATREVFANSAVDFLRKYNF-DGVDLDWEYPVSGGLDGNSKRPEDKQNYTLLLSKIREKLDAAGAVDGKKYLLTIASGASATYAANTELAKIAAIVDWINIMTYDFNGAWQ-KISAHNAPLNYDPAASAAGVPDANTFNVAAGAQGHLDAGVPAAKLVLGVPFYGRGWDGCAQAGNGQYQTCTGG---SSVGTWEAGSFDFYDLEANYINKNGYTRYWNDTAKVPYLYNASNKRFISYDDAESVGYKTAYIKSKGLGGAMFWELSGDRNKTLQNKLKADL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ITX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120716 for 3519 contacts (-34.3/contact) +
2D Compatibility (PS) -42291 + (NN) -24762 + (LL) 9296
1D Compatibility (HY) -20800 + (ID) 6400
Total energy: -205673.0 ( -58.45 by residue)
QMean score : 0.463
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