Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATPPKRFCPSPSTSSEGTRIKKISIEGNIAAGKSTFVNILKQASEDWEVVPEPVARWCNVQSTQEEFEELTTSQKSGGNVLQMMYEKPERWSFTFQSYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESDCMNETEWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTSFDYLQEVPVLTLDVNEDFKDKHESLVEKVKEFLSTL
2NO7 Chain:B ((40-280))
-------------------RIKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSNVQS--------------GGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNG---DAEKPVLFFERSVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNNQF--SLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDF---YESLVEKVKEFLSTL
General information:
TITO was launched using:
RESULT:
Template:
2NO7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106944 for 1682 contacts (-63.6/contact) +
2D Compatibility (PS) -23322 + (NN) -7865 + (LL) 1552
1D Compatibility (HY) -32400 + (ID) 10300
Total energy: -179279.0 ( -106.59 by residue)
QMean score : 0.638
(partial model without unconserved sides chains):
PDB file :
Tito_2NO7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NO7-query.scw
PDB file :
Tito_Scwrl_2NO7.pdb
: