Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNCLHRAELSPSTENSSQLDFEDVWNSSYGVNDSFPDGDYGANLEAAAPCHSCNLLDDSALPFFILTSVLGILASSTVLFMLFRPLFRWQLCPGWPVLAQLAVGSALFS-IVVPVLAPGL---GSTRSSALCSLGYCVWYGSAFAQALLLGCHA-------SLGHRLGAGQVPGLTLGLTVGIWGVAALLTLPVTLASGAS---G--GLCTLIYSTEL-KALQATHTVACLAIFVLLPLGLFGA---KGLKKALG----------------MGPGPWMNILWAWFIFWWPHGVVLGLDFLVRSKLLLLSTCLAQQALDLLLNLAEALAILHCVATPLLLALFCHQATRTLLPSLPLPEGWSSHLDTLGSKS |
| 1U19 Chain:A ((38-328)) | -------------------------------------------------------WQFSMLAAYMFLLIMLGFPINFLTLYVTVQH--KKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGS----------DFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -234198 for 1925 contacts (-121.7/contact) +
2D Compatibility (PS) -24930 + (NN) 4413 + (LL) 2732
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -257583.0 ( -133.81 by residue)
QMean score : 0.234
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