Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDPTVPVFGTKLTPINGREETPCYNQTLSFTVLTCIISLVGLTGNAVVLWLLGY-RMRRNAVSIYILNLAAADFLFLSFQIIRLPLRLINISHL-----IRKILVSVMTFPYFTGLSMLSAISTERCLSVLWPIWYRCRRPTHLSAVVCVLLWGLSLLFSMLEWRFCDFLFSGADSSWCET--------------SDFIPVAWLIFLCVVLCVSSLVLLVRILCGSR--------KMPLTRLYVTILLTVLVFLLCGLPFGILGALIYRMHLNLEVLYCHVYLVCMSLSSLNSSANPIIYFFVGSFRQRQNRQNLKLVLQRALQDKPEVDKGEGQLPEESLELSGSRLGP |
| 1U19 Chain:A ((39-326)) | -------------------------QFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLH-GYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGS--DFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQF--R--NCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243171 for 2056 contacts (-118.3/contact) +
2D Compatibility (PS) -25877 + (NN) 1636 + (LL) 1880
1D Compatibility (HY) -10000 + (ID) 1100
Total energy: -276632.0 ( -134.55 by residue)
QMean score : 0.172
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