Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSLYSEYLNPNKVQEHYNYTKETLETQETTSRQVASAFIVILCCAIVVENLLVLIAVARNSKFHSAMYLFLGNLAASDLLAGVAFVANTLLSGSVTLRLTPVQWFARE-G-----SAFITLSASVFSLLAIAIERHVAIAKVKLYGSD-KSCRMLLLIGASWLISLVLGGLPILGWNCLG-HLEACSTVLPLY--AKHYVLCVVTIFSIILLAIVALYVRIYCVVRSSHADM--------------------------------------------------------------------------------------------------------------------------------------------------------------AAPQTLALLKTVTIVLGVFIVCWLPAFSILLLDYACPVHSCPILYKAHYFFAVSTLNSLLNPVIYTWRSRDLRREVLRPLQCWRPGVGVQGRRRGGTPGHHLLPLRSSSSLERGMHMPTSPTFLEGNTVV |
| 3RZE Chain:A ((9-443)) | ---------------------------------MPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYL-----LMSKWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLW-VIPILGWNH--RREDKCETDFYDVTWFKVMTAIINFYLPTLL--MLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNC--CNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHI------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RZE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -237999 for 1853 contacts (-128.4/contact) +
2D Compatibility (PS) -26726 + (NN) -12697 + (LL) 3948
1D Compatibility (HY) -20400 + (ID) 3100
Total energy: -296974.0 ( -160.27 by residue)
QMean score : 0.230
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