Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEGISNFKTPSKLSEKKKSVLCSTPTINIPASPFMQKLGFGTGVNVYLMKRSPRGLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSLHHPNIVGYRAFTEANDGSLCLAMEYGGEKSLNDLIEERYKASQDPFPAAIILKVALNMARGLKYLHQEKKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTVTDPEACYIGTEPWKPKEAVEENGVITDKADIFAFGLTLWEMMT-LSIPHINLSNDDDDEDKTFDESDFDDEAYYAALGTRPPINMEELDESYQKVIELFSVCTNEDPKDRPSAAHIVEALETDV |
4HZS Chain:A ((127-387)) | --------------------------------RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ--PEAMDDFIREVNAMHSLDHRNLIRLYGVVLT--PPMKMVTELAPLGSLLDRLRKH----QGHFLLGTLSRYAVQVAEGMGYLES-KRFIHRDLAARNLLLATR-DLVKIGDFGLMRALP-------------VPFAWCAPESLKT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-------------SQILHKIDKEGERLPRP-EDCPQD---IYNVMVQCWAHKPEDRPTFVALRDFLLEAQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HZS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83290 for 1931 contacts (-43.1/contact) +
2D Compatibility (PS) -27063 + (NN) -20277 + (LL) 3216
1D Compatibility (HY) -13600 + (ID) 2900
Total energy: -143914.0 ( -74.53 by residue)
QMean score : 0.502
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