Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRHSKRTYCPDWDDKDWDYGKWRSSSSHKRRKRSHSSAQENKRCKYNHSKMCDSHYLESRSINEKDYHSRRYIDEYRNDYTQGCEPGHRQRDHESRYQNHSSKSSGRSGRSSYKSKHRIHHSTSHRRSHGKSHRRKRTRSVEDDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVK---NVDRYCEAARSEIQVLEHLNTTDPNSTFRC--VQMLEWFEHHGHICIVFELLG--LSTY-DFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA-TYDDEHHST-LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYV-SRRCKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKSI |
2F2C Chain:B ((12-305)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------QYEC-AEIG----GKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS-TDRETKLTLVFEHVDQDLTTYLDKVPEPG-VP--TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG-------------------QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG-LPGEE---------------DWP-------QAF---AQPIEKFVTDID---ELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F2C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184746 for 1970 contacts (-93.8/contact) +
2D Compatibility (PS) -28734 + (NN) -10423 + (LL) 9836
1D Compatibility (HY) -21200 + (ID) 5000
Total energy: -240267.0 ( -121.96 by residue)
QMean score : 0.431
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