Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGEAICSALPTIPYHKLADLRYLSRGASGTVSSARHADWRVQVAVKHLHIHTPLLDSERKDVLREAEILHKARFSYILPILGICNEPEFLGIVTEYMPNGSLNELLHRKTEYPDVAWPLRFRILHEIALGVNYLHNMTPPLLHHDLKTQNILLDNEFHVKIADFGLSKWRMMSLSQSRSSKSAPEGGTIIYMPPENYEPGQKSRASIKHDIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQGHRPVINEESLPYDIPHRARMISLIESGWAQNPDERPSFLKCLIELEPVLRTFEEITFLEAVIQLKKTKLQSVSSAIHLCDKKKMELSLNIPVNHGPQEESCGSSQLHENSGSPETSRSLPAPQDNDFLSRKAQDCYFMKLHHCPGNHSWDSTISGSQRAAFCDHKTTPCSSAIINPLSTAGNSERLQPGIAQQWIQSKREDIVNQMTEACLNQSLDALLSRDLIMKEDYELVSTKPTRTSKVRQLLDTTDIQGEEFAKVIVQKLKDNKQMGLQPYPEILVVSRSPSLNLLQNKSM |
| 4ITJ Chain:A ((12-290)) | ------------MKSSDFLE--------FGKVSLAFHRTQG-LMIMKTVYKG-PNCIEHNEALLEEAKMMNRLRHSRVVKLLGVIIEEGKYSLVMEYMEKGNLMHVLKAEM---STPLSVKGRIILEIIEGMAYLHGKG--VIHKDLKPENILVDNDFHIKIADLGLASFKMWSKLN----------GTLYYMAPEHLNDVN-AKPTEKSDVYSFAVVLWAIFANKEPYENAIAEQQLIMAIKSGNRPDVD--DITEYCP--REIISLMKLCWEANPEARPTFPGIEEKFRPFYLSQLE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ITJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162016 for 1952 contacts (-83.0/contact) +
2D Compatibility (PS) -26884 + (NN) -15582 + (LL) 16520
1D Compatibility (HY) -23200 + (ID) 4000
Total energy: -215162.0 ( -110.23 by residue)
QMean score : 0.407
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