Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALTCSTVYNELMPCLGYVQS----GGA-V-----PRACCSGIKTLVSRARATPDRRAACACLKTVAAAAAG------G---PY----------LGRAAGL--PGRCGVQPPFKIDPNVNCNAV
1BEA Chain:A ((15-109))
--------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37833 for 396 contacts (-95.5/contact) +
2D Compatibility (PS) -6544 + (NN) -2644 + (LL) 1828
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -50093.0 ( -126.50 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: