Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTPCEEATNLLTPCLRYLWAPPE----AK-------PSPECCSGLDKVNKGVKTYDDRHDMCICLSSEA-AIT-SA----DQYKFDNLPKLCNVALFAPVGPKFDCSTIKV
1S6D Chain:A ((19-97))
--------EMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDE--------KCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLM----------------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28233 for 393 contacts (-71.8/contact) +
2D Compatibility (PS) -6182 + (NN) -692 + (LL) 1576
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -37831.0 ( -96.26 by residue)
QMean score : 0.146
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: