Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VVVRVEEEEKVVCIVTDLRVCLPAVEAGSQPSVQCCGKLKEQLSCLCGYLKIPSFTQYVSSGKAQKVLTACAIPIPKC
M035 Chain:A ((7-83))
VVVRVEEEEKVVCIVTDLRVCLPAVEAGSQPSVQCCGKLKEQLSCLCGYLKIPSFTQYVSSGKAQKVLTACAIPIPKC
General information:
TITO was launched using:
RESULT:
Template:
M035.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6073 for 527 contacts (-11.5/contact) +
2D Compatibility (PS) -6512 + (NN) 6098 + (LL) 0
1D Compatibility (HY) 3600 + (ID) 150
Total energy: -3037.0 ( -5.76 by residue)
QMean score : -0.075
(partial model without unconserved sides chains):
PDB file :
Tito_M035.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M035-query.scw
PDB file :
Tito_Scwrl_M035.pdb
: