Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DEMMGRCMHEIANCLVAIDKGTKLPSYCCGRMVKPQPCACKYFIKNPVLLPRLLIACRVPHPKC
M035 Chain:A ((1-104))
DEMMGRCMHEIANCLVAIDKGTKLPSYCCGRMVKPQPCACKYFIKNPVLLPRLLIACRVPHPKC
General information:
TITO was launched using:
RESULT:
Template:
M035.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48799 for 419 contacts (-116.5/contact) +
2D Compatibility (PS) -6719 + (NN) -4945 + (LL) 0
1D Compatibility (HY) -11600 + (ID) 3200
Total energy: -75263.0 ( -179.63 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_M035.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M035-query.scw
PDB file :
Tito_Scwrl_M035.pdb
: