Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------------------------------------------VTCSPMQL---SPCATAITSSSPPSALCCAKLKEQRPCLCGYMRNPSLRRFVSTPNARKVSKSCKLPIPRC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
1PS6 Chain:A ((1-328)) | VKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTNRAAMLGLPLTLRPYSPNSPAQPQTAGTLTLLPVALRAPVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLNELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKMIVNTQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1PS6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -8536 for 336 contacts (-25.4/contact) +
2D Compatibility (PS) -7237 + (NN) -5811 + (LL) 0
1D Compatibility (HY) 1200 + (ID) 400
Total energy: -20784.0 ( -61.86 by residue)
QMean score : 0.467
|
|
|