Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IC----NLSDAGLQACKPAAA----VRNPADTPS---SECCDALAAADLPCLC---------RYKGSAGARV--WVRFY-GIDLNRAMTL------PGKCGLTLPAH---C-----
1BEA Chain:? ((5-120))
SCVPGWAIPHNPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISGVAECPWILG
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28189 for 394 contacts (-71.5/contact) +
2D Compatibility (PS) -8522 + (NN) -4756 + (LL) 0
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -45817.0 ( -116.29 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: