Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QDNNPLEHCRDV--FVSFMPCMGFVEGIF------QQP-----------SPDCCRGVTHLNNVVKFTSPGSRNRQDSGETERVCLCIEIMGNANHLP-------FL-PAAINNLPLRCSLTLSFPISVDMDCSQFRNTKNPDVEKLN
1W2Q Chain:A ((14-114))
------SSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMEN----------------TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAP------------------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58277 for 461 contacts (-126.4/contact) +
2D Compatibility (PS) -7133 + (NN) 961 + (LL) 1140
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -65459.0 ( -141.99 by residue)
QMean score : 0.113
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: