Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QNICPRVNRIVPPCVAYGL----GR-AP---IAPCCRALNDLRFVNTRNLRRAACRCLVGVVSRNP---GLTQ--N-------PRFQNIPRDCRNTFVRPFWWRPRIQCGRINLTDKLIYLDAEE
1HSS Chain:A ((15-103))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHIS-------EWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPI----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45839 for 375 contacts (-122.2/contact) +
2D Compatibility (PS) -5813 + (NN) -746 + (LL) 3096
1D Compatibility (HY) -4400 + (ID) 600
Total energy: -54302.0 ( -144.81 by residue)
QMean score : 0.305
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: