Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVTCTVVTKALGPCMTYLKGT---G--A-TP----------PPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKS----LN-----YKVAARLASQCGVRMSYSVSPNVNCNSVQ
1W2Q Chain:A ((23-114))
--------VNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-----N-TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAP-------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25832 for 403 contacts (-64.1/contact) +
2D Compatibility (PS) -6699 + (NN) 546 + (LL) 2060
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -32425.0 ( -80.46 by residue)
QMean score : 0.413
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: