Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SVAPAPAPGSEETCGTVVGALMPCLPFVQGKEKEPSKGCCSGAKRLDGETKTGPQRVHACECIQTAMKTYSDIDGKLVSEVPKHCGIVDSKLPPIDVNMDCKTLG
M035 Chain:A ((11-122))
----------EETCGTVVGALMPCLPFVQGKEKEPSKGCCSGAKRLDGETKTGPQRVHACECIQTAMKTYSDIDGKLVSEVPKHCGIVDSKLPPIDVNMDCKTLG
General information:
TITO was launched using:
RESULT:
Template:
M035.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50835 for 691 contacts (-73.6/contact) +
2D Compatibility (PS) -9526 + (NN) -3178 + (LL) -24
1D Compatibility (HY) -12400 + (ID) 4750
Total energy: -80713.0 ( -116.81 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_M035.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M035-query.scw
PDB file :
Tito_Scwrl_M035.pdb
: