Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTC--GQV--QGNLAQCIGFLQK---GGVVP----PSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAV-------RGIN----PNNAEALPGKCGVNIPYKISTSTNCNSIN---------
1HSS Chain:A ((5-124))
-MCYPGQAFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVV--DASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44079 for 507 contacts (-86.9/contact) +
2D Compatibility (PS) -8437 + (NN) -3054 + (LL) 864
1D Compatibility (HY) -5600 + (ID) 900
Total energy: -61206.0 ( -120.72 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: