Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------AIECSDVLSRPVHCLSYFVTPRATLTPTSACCRESEEVL--------------------GMANSMGAKEDLCNCFVGLIRGFRPNPNKIEGLLSSCALQLFFPIDPVTALPDCTQIQ--------
1OTG Chain:A ((1-125))
PHFIVECSDNIREEADLPGLFAKVNPTLA-----ATGIFPLAGIRSRVHWVDTWQMADGQHDYAFVHMTLKIGAGRSLESRQQAGEMLFELIKTH------FAALMESRLLALSFEI--EELHPTLNFKQNNVHALFK
General information:
TITO was launched using:
RESULT:
Template:
1OTG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40454 for 414 contacts (-97.7/contact) +
2D Compatibility (PS) -8605 + (NN) 3043 + (LL) -164
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -49730.0 ( -120.12 by residue)
QMean score : 0.265
(partial model without unconserved sides chains):
PDB file :
Tito_1OTG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OTG-query.scw
PDB file :
Tito_Scwrl_1OTG.pdb
: