Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------LTCGVVAS--NLAPCIGYLRNGGKVPDPC---CKGVGALNNAAK-----------TTKDRRDACNCIKTTATQI-----GGVNAANAAALPGFCRVNIPYKISTSTNCASIK---------- |
| 1O4U Chain:A ((1-273)) | MEKILDLLMSFVKEDEGKLDLASFPLRNTTAGAHLLLKTENVVASGIEVSRMFLEKMGLLSKFNVEDGEYLEGTGVIGEIEGNTYKLLVAERTLLNVLSVMFSVATTTRRFAEKLKHAKIAATRKILPGLGVLQKIAVVHGGGDCVMIKDNHLKMYGSAERAVQEVRKIIPFTTKIEVEVENLEDALRAVEAGADIVMLDNLSPEEVKDISRRIKDINPNVIVEVSGGITEENVSLY-DFETVDV---ISSSRLTLQEVFVDLSLEIQR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26306 for 455 contacts (-57.8/contact) +
2D Compatibility (PS) -8939 + (NN) -1608 + (LL) -124
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -39627.0 ( -87.09 by residue)
QMean score : 0.409
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