Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IDCAQVNLLLGTCMPYLI----GFDSSP-----SLACCAGVRNLKRLAPTTADRRVACDCVKAAAARHP-------N---IR----------DDAASTL--PNKCGVDFNIPVSNTTKCQE
1BEA Chain:A ((16-110))
--------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATIS----------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49711 for 389 contacts (-127.8/contact) +
2D Compatibility (PS) -6626 + (NN) -2310 + (LL) 1720
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -61077.0 ( -157.01 by residue)
QMean score : 0.348
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: