Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AIDCSTVTALVSACSTFITYGAP-DP------------IPGSPCCDAVVGLNSIADSIDNRRSVCRCLMGLIATY---N---P-----NATAIATLPGFCGISLGFNLDPNTDCNLVDGAASNE
1SM7 Chain:A ((14-100))
---------HLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE--------DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQ--------------------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71010 for 417 contacts (-170.3/contact) +
2D Compatibility (PS) -6243 + (NN) 2720 + (LL) 1120
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -76463.0 ( -183.36 by residue)
QMean score : 0.155
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: