Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSDCTNVLISMSPCLNYITGNSSTPSSQCCTQLASVVRSS-PQCLCQVLNGGGSSLGIEVNKTQAIALPGA-CNVQTPPISSCN--
1HYP Chain:? ((6-80))
-PSCPD----LSICLN-ILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLR----ALGI-LNLNRNLQLILNSCGRSYPSNATCPRT
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36559 for 451 contacts (-81.1/contact) +
2D Compatibility (PS) -7499 + (NN) -1730 + (LL) 316
1D Compatibility (HY) -6400 + (ID) 1100
Total energy: -52972.0 ( -117.45 by residue)
QMean score : 0.276
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: