Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---AGLSPSQCKQEQTL--GVNACRDIL---LGKAPS-----------PACCGRVRVSHVECIC---------PAITPKLASLINVKQAIKLLQDCGRKVPRHFKCGSLNFP
1S6D Chain:A ((1-103))
PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAH--NLPIECN--LMSQ-PCQM----
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31949 for 428 contacts (-74.6/contact) +
2D Compatibility (PS) -7859 + (NN) -3042 + (LL) 732
1D Compatibility (HY) -5600 + (ID) 850
Total energy: -48568.0 ( -113.48 by residue)
QMean score : 0.425
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: