Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------AGEC-----GRASADRVALRMAPCISA-----ADDP--QSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMAD-----------RPV--G-----YKCGD----YTLP------------------------------------ |
1EFP Chain:A ((1-183)) | AVLLLGEVTNGALNRDATAKAVAAVKALGDVTVLCAG-ASAKAAAEEAAKIAGVAKVLVAEDALYGHRLAEPTAALIVGLAGDYS---HIAAPATTDAKNVMPRVAALL-DVMVLSDVSAILDADTFERPIYAGNAIQVVKSKDAKKVFTIRTASFDAAGEGGTAPVTETAAAADPGLSSWVADEVAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8385 for 473 contacts (-17.7/contact) +
2D Compatibility (PS) -9289 + (NN) -2415 + (LL) 248
1D Compatibility (HY) -1600 + (ID) 1100
Total energy: -22541.0 ( -47.66 by residue)
QMean score : 0.307
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