Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKTPIRSAAASLSPCLTAVGNVRASVPPACCSKVGALIK-TAPKCLCAVLLSPLAMQAGI-KPGIAIT-IPKRCNIKNRPVGKKCGRYTVP
1HYP Chain:? ((6-80))
-PSCP---------DLSICLNILGGSLGTV-DDCCALIGGLGDIEAIVCLC-----IQLRALGILNLNRNLQLILNSCG-RSYPSNATCPRT---
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47924 for 469 contacts (-102.2/contact) +
2D Compatibility (PS) -7241 + (NN) 60 + (LL) 1656
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: -58949.0 ( -125.69 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: