Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AAEVSCGDAVSALIPCGSFLVGAV-----AGAP-----------SESCCRGAQGLRRMAGTPGARRALCRCLEQSGPSF-----GV----L-PDRARQLPALCKLGISIPVSPHTDCDKIQ
1W2Q Chain:A ((23-114))
----------VNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME----NT--QGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAP-------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32715 for 403 contacts (-81.2/contact) +
2D Compatibility (PS) -6642 + (NN) 396 + (LL) 1428
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -40483.0 ( -100.45 by residue)
QMean score : 0.210
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: