Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTCQQALTELIPCRPFLIAV---A--P-SP-----------TAPCCTGVSDVKAAASTTEARRDLCECFEKNAPAY-----G--V--K-PEKAKLLPGLCGVTVPVPIDPSVNCATIT
1W2Q Chain:A ((23-113))
-------VNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME----N--TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRA--------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32897 for 391 contacts (-84.1/contact) +
2D Compatibility (PS) -6293 + (NN) 863 + (LL) 1928
1D Compatibility (HY) -2800 + (ID) 500
Total energy: -39699.0 ( -101.53 by residue)
QMean score : 0.277
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: