Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--DVNQDKTECANQLVG---LASCLPYV-----GGQSKTPT-------IDCCSGLKQVLDKSRKCLCVLIKDRDDPSLGLKINATLAAT----LPSTCHAPVNMTECI
1S6D Chain:A ((1-103))
PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIR-MRDQVMSMAHNLPIECNLMSQPCQM-
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34555 for 503 contacts (-68.7/contact) +
2D Compatibility (PS) -8273 + (NN) -2594 + (LL) 572
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -49700.0 ( -98.81 by residue)
QMean score : 0.369
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: