Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALSCSTVYNTLMPCLGYVQ----SGGT-V-----PRACCTGIKRLVSGARSTQDRRTVCVCLKNVSSGAKG------G---PY----------LTRAAGL--PARCGVPLPYKTGPNDSCSSIPIYW
1BEA Chain:A ((15-110))
--------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATIS---------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42992 for 394 contacts (-109.1/contact) +
2D Compatibility (PS) -6598 + (NN) -1607 + (LL) 1172
1D Compatibility (HY) -2400 + (ID) 900
Total energy: -53325.0 ( -135.34 by residue)
QMean score : 0.365
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: