Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AMSAAECKEERRLGIKVCTPVVYG-----------NDPTPACCERVRVTH----VECVCPMITPKLAPLIDVDRLVRLIKG-CGRKVPRHFKCGGITTP
1HYP Chain:? ((6-80))
-------------------PSCPDLSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRA--LGILNLNRNLQLILNSCGRSYPSNATCPRT---
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33909 for 314 contacts (-108.0/contact) +
2D Compatibility (PS) -6045 + (NN) -2488 + (LL) 2020
1D Compatibility (HY) -4400 + (ID) 650
Total energy: -45472.0 ( -144.82 by residue)
QMean score : 0.247
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: