Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DTSPSQCKEERNL--LVNACRPVIYG----RS-------P------SADCCQRVRVSHVECVCPYVTPKTAAIIG-----VI----GVDNVVKKIEGCGRTVPRKFKCGSITTP
1SM7 Chain:A ((2-103))
---PQKCQREFQQEQHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGT---------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25755 for 519 contacts (-49.6/contact) +
2D Compatibility (PS) -7287 + (NN) 764 + (LL) 168
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -34410.0 ( -66.30 by residue)
QMean score : 0.157
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: