Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DQVCKGDFGSLVEQCLQYVQKPGPKTPPSEGCCNAINTVD----IPCVCQHLPPVVGDIVSLEKVAFVLRA-CGKPLEPGTKCGNYTVPPAV
1HYP Chain:? ((6-80))
-PSCPD-----LSICLNILGG---SLGTVDDCCALIGGLGDIEAIVCLCIQLRAL--GILNLNRNLQLILNSCGRSYPSNATC-----PRT-
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43600 for 441 contacts (-98.9/contact) +
2D Compatibility (PS) -7107 + (NN) -3762 + (LL) -200
1D Compatibility (HY) -8400 + (ID) 800
Total energy: -63869.0 ( -144.83 by residue)
QMean score : 0.401
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: