Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------AITCGTVTGSLAPCIGYLKGGSGPSAAC---CGGVKRLNSAAT-----------TTPDRQAACNCLKSAAGAIS-----GLNPNIAAGLPGKCGVNIPYKISTSTNCATIRA------- |
| 1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAA------GSVVDALRAVRNA-APDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATY-AETGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28806 for 410 contacts (-70.3/contact) +
2D Compatibility (PS) -8925 + (NN) -4186 + (LL) 80
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -45487.0 ( -110.94 by residue)
QMean score : 0.339
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