Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APIKVAGGVGNCEKDMQWCIDKTEFFTHGYIYERCCYNMIMKKKCMCLFLKSPKLKIAARNVNNACGRGGLPKDAFSEFKC
M035 Chain:A ((5-91))
APIKVAGGVGNCEKDMQWCIDKTEFFTHGYIYERCCYNMIMKKKCMCLFLKSPKLKIAARNVNNACGRGGLPKDAFSEFKC
General information:
TITO was launched using:
RESULT:
Template:
M035.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1056 for 597 contacts (-1.8/contact) +
2D Compatibility (PS) -7907 + (NN) -1619 + (LL) 0
1D Compatibility (HY) 2000 + (ID) 100
Total energy: -8682.0 ( -14.54 by residue)
QMean score : -0.154
(partial model without unconserved sides chains):
PDB file :
Tito_M035.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M035-query.scw
PDB file :
Tito_Scwrl_M035.pdb
: