Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRISNFGPLIAILSSSVLSFTAGQYFSYVIAAVSSSSAVTAAPLAIFAVSMVIALVSAAYLIKLAVSIAGNKKEAGPSREALDRSGQQCTVSYGLTQESVCKDGALKNELNKHISFSSSSPICGTKTFSLSAPLLLNNALPPLLSLPLSQDAGAAPPPPPPPLFSQISLTQPSSAGLFAGVKNTKLKKISGPVKTPEYDDSRNAMLKQIRQGTKLLTKEERDEKLKKQAAMKDDKKEQSSDNVGGYSSTALFEKLKYRRLAIEFSDSESDRSNYSDNGDWSDRSVDKQKELREKKLTKRRGKSTSSNSQPYDEKSSATPSSGYISDDDADQQEPETATSSSCWSNKKEPPPVPPKPNLKCVNLQKEPPPVPPKPNLKCVNLQKESRAFLIKQ |
3M3N Chain:W ((1-50)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACSGNKAALLDQIREGAQL-KKVGRDALLDQIRQGIQLKKV----------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M3N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5677 for 125 contacts (45.4/contact) +
2D Compatibility (PS) -4196 + (NN) -2092 + (LL) 16012
1D Compatibility (HY) -2000 + (ID) 650
Total energy: 12751.0 ( 102.01 by residue)
QMean score : 0.729
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