Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------MKMVKGILCDWLGVTELQESQKIDAEQFQRIFSALKK-WQEAQKVNTEQFEKVFSALEEKIGTEQFQSMQEYLNGLQKKFTGLEEKAGTLIETVGEQEKIMLTCCIIASVITLAAIS-FITFCIYQGVKSGRERQRSLSDISAQNLMNQ----THQAQNFM------------------------------------------------------------------------------------------------------------------------------------------------- |
| 3DSK Chain:A ((24-489)) | DLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDKVEKKDLLTGTYMPSTELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSRNRIFPEFQATYSELFDSLEKELSLKGKADFGGSSDGTAFNFLARAFYG-TNPADTKLKADAPGLITKWVLFNLHPLLSIGLPRVIEEPLIHTFSLPPALVKSDYQRLYEFFLESAGEILVEADKLGI------SREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVGTSPLGSSVNFSSLRKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DSK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15161 for 892 contacts (-17.0/contact) +
2D Compatibility (PS) -15293 + (NN) -2332 + (LL) 712
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -35174.0 ( -39.43 by residue)
QMean score : 0.306
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