Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEVVTFGCRLNFYESELIKEALRKAERENVVVVHSCAVTNEAERQVKQKIRKIYKNDPNKEIIVVGCAVQLDPESYSNIPGVSKVLGNQDKLKTENYLLSNNKILVNDNQASKSEPALIDKFKDKSRAFIEVQNGCDHSCTFCSITEARG-NNRSVPINNIIEQIKIFVANGYQEVVFTGVD-ITDFGTDLFGKPSLGLMVRRVLKDVPELKRLRLSSIDVAEVDDELMDLIVNESRFMPHLHLSLQSGNNLILKRMKRRHSREQVIEFCHKVKSLRSNIAYGADIIAGFPTETDEMFQDTVNLLEETNTVYLHAFPYSKRKNTPAARMPQVPENVRKERVKNLRKINKAMMSNFYQSLIGTKQSVLVEQNNIGRAENFALVKFTSKIQAKSIVKATIIGMESGYLVGSIIP |
| 3T7V Chain:A ((61-267)) | ------------------------------------------------------------------------------------------------------------------------------LNCFIYFSTYCKNQCSFCYYNCRNEINRYRLTMEEIKETCKTLKGAGFHMVDLTMGEDPYYYED----PNRFVELVQIVKEE----LGLPIM-ISPGLMDNATLLKAR--EKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQG--YCVEDGILTGVGN-DIESTILSLRGMSTNDPDMVRVMTFLPQEGTPLEGFRDKSNLSELKIISVLRLMFPKRLIPASLDLEGIDGMVLRLNAGANIVTSILPPDSQLEGVANYDRDLEERDRDIKSVVRRLEI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T7V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91717 for 1589 contacts (-57.7/contact) +
2D Compatibility (PS) -21736 + (NN) -10391 + (LL) 9152
1D Compatibility (HY) -7200 + (ID) 1450
Total energy: -123342.0 ( -77.62 by residue)
QMean score : 0.464
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