Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRILNYTIINLVISKSLLLNMNGIKKGIIHIIGIGGIGMSAIAEILHNSNYKVQGSDAQSNNNVDRLQKLGIEIYIGHNANNIKQAQVVVYSSAIKSDNVELVAARNNNKTILHRSGILAEIMKDKYVIAVSGSSGKTTTTAMIASIFDHSNTDATVIV-------------GGI-LN------------------------SYQ----------NNSKLGKSDILLIEADES-D-ETMLKIPANIAVITSINNDHIDHYG-TFDNIKNAFSQFINSADFAIL-PD-SVGIN---D-SE-SVSIKFGFEGVYPFVIQSPFVVPVHDIGIKKKKSASCSIKASNVKANNIRQHNNSIEFDVLIDGCSIDRSHWIPASCTETTAVLPLSSTQITSLRSRIIKNVVLSNAIGMHKVSNALAAISVAIKLGIN--DVDIKKGLLEFKGVARRFSLVADIKDVKLIEDYAHHPSEIQATLTAARSIT-KGKIIGIIEPFRFARIRNFFDEFIRIFM-MFDYVILVPVHPPEDKPILGCRIDDIQEALISNGFNNVKIMNDALLISNFISDSTNSGDIVLFIGAGINVARLARETVVFMSGVEI |
1O5Z Chain:A ((52-422)) | -----------------------------------------------------------------------------------------------------------------------------YKTIHIGGTNGKGSVANMVSNILVSQGYRVGSYYSPHLSTFRERIRLNEEYISEEDVVKIYETMEPILNELDKEEIFSPSFFEVVTAMAFLYFAEKNVDIAVLEVGLGGRLDATNVVFPLCSTIVTVDR-------YTIEQIAWEKSGIIKERVPLVTGERKREALKVMEDVARKKSSRMYVIDK------------------------------DFSVKVKSLK--LHENRFDYCGEN----------------------------------TFEDLVLTMNGPHQIENAGVALKTLEATGLPLSEKAIREGLKNAKN-LGRFEILEK-NGKMYILDGAHNPHGAESLVRSLKLYFNGEPLSLVIGILDD---KN-REDILRKYTGIFERVIVTRVPSPR-----MKDMNSLVDMAKKF-FKNVEVIEDPLEAIE------STERATVVTGSLFLVGYVREFLTTGKINEEW |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O5Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193332 for 2559 contacts (-75.5/contact) +
2D Compatibility (PS) -32406 + (NN) -6729 + (LL) 14856
1D Compatibility (HY) -7600 + (ID) 2600
Total energy: -227811.0 ( -89.02 by residue)
QMean score : 0.505
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