Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLPVVHLLPNNDLAQFNYRHVKIDGILSDIELYVFAGQSGYHALSPMLLTTGRYMLVNKGIVREKEEKKAKIAKVVADGVLYCDSSKSKSWLIKNDIALNTWFTLSTEEISNELGIELEKCILWQKGFSGKLAIQPMKHLEYAITWFALSLIWLIMCIAYYRQNKCHLSS
2L82 Chain:A ((1-162))
MSQIFVVFSSDPEILKEIVREIKRQGVRVVLLYSD-QDEKRRRERLEEFEKQGVDVRTVEDKEDFRENIREIWERYPQLDVVVIVTTDDKEWIKDFIEEAKE---RGVEVFVVYNNKDDDRRKEAQQEFRSD---GVDVRTVSDKEELIEQVRRFVRKVGSLEHHHHHH--
General information:
TITO was launched using:
RESULT:
Template:
2L82.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20456 for 1258 contacts (-16.3/contact) +
2D Compatibility (PS) -17429 + (NN) -4779 + (LL) 940
1D Compatibility (HY) 5200 + (ID) 750
Total energy: -37274.0 ( -29.63 by residue)
QMean score : 0.220
(partial model without unconserved sides chains):
PDB file :
Tito_2L82.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L82-query.scw
PDB file :
Tito_Scwrl_2L82.pdb
: