Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNTHASVKNLSLWYGSKQALFDINLDICKKKVTAFIGPSGCGKSTFLRCFNRMNDYVPGCKVAGKLDIDGLGDIYSRNVDVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGP-KLHGMVKNKQKLDEIVENSLTKVGLWEELKDRLQDSALDLSGGQQQRLCISRAIAVKPTILLMDEPCSALDPMATNAIENLIQELKLR-FTIIMVTHSMKQAKKLSDSIIFFCNGKIVESGSVQEIFENARSPLTKEYILDH
3C41 Chain:K ((6-238))-------VHQLKKSFGSLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFD-----EGEIIIDGI-NLKAKDTNLNKVREEVGMVFQRFNLFPHMTVLNNITLAPMKVRKWPREKAEAKAM--ELLDKVGL----KDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANEGMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKV


General information:
TITO was launched using:
RESULT:

Template: 3C41.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141468 for 1870 contacts (-75.7/contact) +
2D Compatibility (PS) -24410 + (NN) -8952 + (LL) 924
1D Compatibility (HY) -18800 + (ID) 4350
Total energy: -197056.0 ( -105.38 by residue)
QMean score : 0.542

(partial model without unconserved sides chains):
PDB file : Tito_3C41.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C41-query.scw
PDB file : Tito_Scwrl_3C41.pdb: