Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MNMYRVLLVLALLTSS---------NLNALINYSK-PISVDSRIKTFVYSPN--EVFTVIFSQGYYSYIEFAEGEKVKNIAVGDASSWR-ISPYDN-KLLIMPFEVSSRTNMIITTTKKRNYIFDLISRPNYDKYPD--------TDAEKVSHDY-SAEKDISYVVR------------FYYPKEEDEF----DIDL-DEISAPTQMQYVVDRPEKIIQENDTKYNYTYIDEGGNADMIPIE-LFDDGYLTYFKFRD---SNKIPQIFAKD-------------------------------GKTR-LPCK------RLLFDGYVIIKGVHKKLFMRYENDEVEIINRSL-------------------------------- |
| 4DIM Chain:A ((3-400)) | DNKRLLILGAGRGQLGLYKAAKELGIHTIAGTMPNAHKPCLNLADEISYMDISNPDEVEQKVKDLNLDGAATCCLDTGIVSLARICDKENLVGL---NEEAAIMCGDKYKMKEAFKKYNVNTARHFVVRNENELKNALENLKLPVIVKATDLIYIAKKEEEAIDGFNETMNLTKRDYCIVEEFIEGYEFGAQAFVYKNDVLFVMPHGDETYMSHTAVPVGHYVPLDVKDDIIEKTKTEVKKAIKALGLNNCAVNVDMILKDNEVYIIELTGRVGANCLPELVEINYGIEYYKMIASMAISENPLVFWSQKSKENKAGLARMIIETEKSGILKEILNSNAKDDDIVEITFFKEENDEIKKFENSNDCIGQIIVKEETLDKCKDKLDVIINNINIILK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4DIM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 61836 for 1705 contacts (36.3/contact) +
2D Compatibility (PS) -26630 + (NN) 8050 + (LL) 164
1D Compatibility (HY) 10000 + (ID) 800
Total energy: 52620.0 ( 30.86 by residue)
QMean score : 0.061
|
|
|