Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVQATYASISLPGISSVEDVLEDARFGKLFILVDDENRENEGDLIVLAEKLKPEHVAFMVRYGTGIVFLAMTRLHMGRLGLEFMRRSNIDEKLTPHTAFTTSIDARYGIATGVSAHDRTHTILTAIDGKSTQDDIITPGHVFPIIANDGGVLARNGHTEASVEIAKLIGYNHAAVGCELVND-DGSMMRLPELLKFAEQHNIKLTTIDKLIRYIKKLS
2RIU Chain:A ((5-203))
-------------FTPIEEALEAYKNGEFLIVMDDEDRENEGDLIMAAELITQEKMAFLVRYSSGYVCVPLSEERANQLELPPMLA---------GTAYTITCDFAEGTTTGISAHDRALTTRSLANPNSKPQDFIKPGHILPLRAVPGLLKKRRGHTEAAVQLSTLAGLQPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIININQLVEYIS---
General information:
TITO was launched using:
RESULT:
Template:
2RIU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145668 for 1640 contacts (-88.8/contact) +
2D Compatibility (PS) -21141 + (NN) -7466 + (LL) 1452
1D Compatibility (HY) -16400 + (ID) 4050
Total energy: -193273.0 ( -117.85 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_2RIU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RIU-query.scw
PDB file :
Tito_Scwrl_2RIU.pdb
: