Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARRNKARKRKISPDSRYDSVLLMRFINVIMKYGKKSVAEKIVYNALSSAEKEVNERGVSIFETAVENVTPSVEVRSRRIGGATYQVPVEVKKDRAVSLALRWIVKSASAMRKKSGKGFFKCLCSEILDAYNKRGGAFKMCEEKYKMAEANKAFSHLRF
2HHH Chain:G ((2-156))
-ARRRRAEVRQLQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQEKTGQEPLKVFKQAVENVKPRMEVRSRRVGGANYQVPMEVSPRRQQSLALRWLVQAAN---QRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEANRAYAHYRW
General information:
TITO was launched using:
RESULT:
Template:
2HHH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73553 for 1139 contacts (-64.6/contact) +
2D Compatibility (PS) -16620 + (NN) -7049 + (LL) 660
1D Compatibility (HY) -10400 + (ID) 3450
Total energy: -110412.0 ( -96.94 by residue)
QMean score : 0.591
(partial model without unconserved sides chains):
PDB file :
Tito_2HHH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HHH-query.scw
PDB file :
Tito_Scwrl_2HHH.pdb
: