Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIISLNNNSCSVEIKKKLLSIITKVIEKNTWTQAHAAERLGVDQPKISQIKNGKTDGFSLERLLGFLKKFDHEITITITESQAVKPETEKVKREVGSP
3G5G Chain:A ((5-73))
--------------LLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRN-LTIKSLELIMKGLEVSDVVFFEMLIKEILK-----------
General information:
TITO was launched using:
RESULT:
Template:
3G5G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25870 for 464 contacts (-55.8/contact) +
2D Compatibility (PS) -7521 + (NN) -3280 + (LL) 1652
1D Compatibility (HY) -4800 + (ID) 600
Total energy: -40419.0 ( -87.11 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_3G5G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G5G-query.scw
PDB file :
Tito_Scwrl_3G5G.pdb
: